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[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia

Sequence alignment tools

Extension to ArgParse.jl, enabling parsing of command line parameters to types in Bio.jl.

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Julia utilities for interacting with biomedical databases and biomedical application programming interfaces (APIs)

Julia's package for working on Bioinformatics with DNA, RNA and Protein Sequences

Julia interface to APIs for various bio-related web services

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Julia functions to process electroencephalographic (EEG) recordings

Fast and scalable cell search tool

Algorithms from circuit theory to predict connectivity in heterogeneous landscapes

High-level, high-performance, constraint-based reconstruction and analysis in Julia

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Pooled CRISPR screen optimization tool

A library of data interpolation and smoothing functions

DCE MRI analysis in Julia

Julia package for diversity measurement

Everything you've never dreamed about measuring on ecological networks.

Process EEG files in Julia

Electronic Microscopy Image Reconstruction Toolbox using julia language

Ensemble Samplers for Julia

A Julia package to fold all local and long-range RNA duplexes.

Utilities to read/write FASTA format files in Julia

An agent based life cycle model for managed fisheries

(No maintenance) Detect gene fusion directly from raw fastq files

Functions and types to access GBIF data from Julia

Manage Local Genome Annotation files

A modern genomics framework for julia

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Stochastic Gillespie-type simulations using Julia

HyperNEAT

Ice-seawater interface calculations using level set methods

A data structure for efficient manipulation of sets of intervals

Julia for Whole-genome Analysis Software

A Julia package for finding longest common and longest contiguous subsequences

Package to calculate Leaf Area Index from Hemisperical Images.

MendelBase contains the base functions of OpenMendel.

K-mer counting algorithms and count-data utilities for the BioJulia framework

Easily embed annotations in your microscopy images