ClimaAtmos.jl is a library for building atmospheric circulation models that is designed from the outset to leverage data assimilation and machine learning tools. We welcome contributions!

High level functions for analyzing the output of simulations

Implementation of variational Bayes inference algorithms

A simple domain-specific language (DSL) for defining differential equations for use in scientific machine learning (SciML) and other applications

🧬High-performance genetics- and genomics-related data visualization using Makie.jl

A julia package for representing and manipulating model semantics

Solid state detector field and charge drift simulation in Julia

WIP successor to Soss.jl

Julia package for formulating and analyzing stochastic recourse models.

Preheat your MCMC

Flexible filtering and smoothing in Julia

Modeling and Simulation of 3D systems

Monte Carlo Tree Search for Markov decision processes using the POMDPs.jl framework

A framework for developing multi-scale arrays for use in scientific machine learning (SciML) simulations

Survival analysis in Julia

Implementation of the Deep Q-learning algorithm to solve MDPs

Simulation, visualization, and inference of individual level infectious disease models with Julia

Clique recycling non-Gaussian (multi-modal) factor graph solver; also see Caesar.jl.

Structured optimization in Julia

Distributed table structures and data manipulation operations built on top of Dagger.jl

The amazing Reaction Mechanism Simulator for simulating large chemical kinetic mechanisms

Julia toolkit for open quantum system simulation.

A Julia package for representing infinite-dimensional arrays

Simulation and visualization of articulated rigid body systems in Julia

Bayesian Generalized Linear models using `@formula` syntax.

Inference of microbial interaction networks from large-scale heterogeneous abundance data

A Julia package for Deep Backwards Stochastic Differential Equation (Deep BSDE) and Feynman-Kac methods to solve high-dimensional PDEs without the curse of dimensionality

A simple tool for simulating trapped ion systems

Sequential Monte Carlo algorithm for approximation of posterior distributions.

Generalized mean-field equations in open quantum systems

DIVAnd performs an n-dimensional variational analysis of arbitrarily located observations

Econometrics in Julia

Restricted Boltzmann Machines in Julia

Taylor-mode automatic differentiation for higher-order derivatives

Global glacier model using Universal Differential Equations for climate-glacier interactions

Everything you've never dreamed about measuring on ecological networks.

Turing + Makie = Turkie

A comprehensive suite of coherent noise algorithms and composable tools for manipulating them.

Hyperparameter optimization algorithms for use in the MLJ machine learning framework

Fast matrix multiplication and division for Toeplitz matrices in Julia