BinBencherBackend.jl

Library for BinBencher - metagenomic binning benchmarking tool
Author jakobnissen
Popularity
1 Star
Updated Last
2 Months Ago
Started In
January 2023

BinBencherBackend

Documentation Latest Release

This package is used to benchmark and interactively explore the results of metagenomic binning given a dataset. This is the Julia backend of the command-line tool BinBencher [work in progress].

Installation

  • Install Julia (ideally using Juliaup: https://github.com/JuliaLang/juliaup) or from the official website www.julialang.org
  • Use the Julia package manager to install this package: ] add BinBencherBackend

Documentation

Basic usage:

using BinBencherBackend
ref = Reference("files/ref.json")
bins = Binning("files/clusters.tsv", ref)
print_matrix(bins)

For more, see the documentation

Used By Packages

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