Actin rings dynamics simulation package
A Julia package for simulating the dynamics of passively crosslinked actin rings.
This package allows the SDEs described in Ref. 1 to be solved, and provides methods for directly calculating the friction coefficients described in the same paper.
Installation
The package can be installed by starting the Julia REPL, typing ] to enter package mode, and running
add ActinFriction
to install from the General registry, or by running
add https://github.com/cumberworth/ActinFriction.jl
to install directly from the development repository.
A related python package, actinfrictionpy, includes code for analyzing and plotting the output from these ...
References
[1] A. Cumberworth and P. R. ten Wolde, Constriction of actin rings by passive crosslinkers, arXiv:2203.04260 [physics.bio-ph].