Dependency Packages
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SimDNA.jl4Generate simulated DNA sequences for regulatory genomics problems
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UnfoldBIDS.jl4-
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GibbsTypePriors.jl4Computing the prior number of clusters for Gibbs-type priors.
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RPkg.jl4Julia Style Package Manager for RCall users
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Solaris.jl4Lightweight module for fusing physical and neural models
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MCMCTesting.jl4Hypothesis Tests for Validating MCMC Kernels
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BulkLMM.jl4Linear mixed model genome scans for many traits
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OnlineLogBinning.jl4Julia package to determine effective number of uncorrelated data points in a correlated data stream via an O(log N) online binning algorithm.
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QuasiGLM.jl4Adjust Poisson and Binomial Generalised Linear Models to their quasi equivalents for dispersed data
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MatrixLMnet.jl3Core functions to obtain L1-L2 penalized estimates for matrix linear models.
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HighDimMixedModels.jl3Julia package for fitting regularized linear mixed-effect models on high-dimensional omics data.
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UnivariateDensityEstimate.jl3Univariate density estimation via Bernstein polynomials; able to model explicit combinatorial shape constraints.
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GenFlux.jl3-
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TraitSimulation.jl3Simulate phenotypes from any GLM model
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MaxEntropyGraphs.jl3Julia implementation of maximum entropy graph models
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Hymod.jl3HYMOD model implementation in Julia
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OptiMimi.jl3Optimization for the Mimi.jl modeling framework
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OptimizedEinsum.jl3Julia rewrite of opt_einsum Python package
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MultiData.jl3Multimodal datasets for Machine-Learning
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MulticlassPerceptron.jl3MulticlassPerceptron.jl
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ForecastEval.jl3Forecast evaluation procedures for time-series data
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TinyGibbs.jl3Tiny Gibbs sampler making use of AbstractMCMC.jl and MCMCChains.jl
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SeaPearlExtras.jl3Non-critical functions for SeaPearl
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MonteCarloMeasurementUncertainty.jl3A Julia package for measuring observables from a time series generated by Monte Carlo sampling methods.
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PeriodicHiddenMarkovModels.jl3Non-homogenous Hidden Markov Models
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PERMANOVA.jl3-
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ControlledHiddenMarkovModels.jl3A package for Hidden Markov Models with exogenous control variables.
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MimiCIAM.jl3-
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InfectionSpreading.jl3-
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ExactWrightFisher.jl3Exact simulation of the Wright--Fisher diffusion
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PhysicsInformedML.jl3Physics-informed Machine Learning
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PhysiologyAnalysis.jl3Julia package for opening and analyzing electrophysiological data
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SimpleCrop.jl3🌱 example of DSSAT-like crop model written in Cropbox
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StarFormationHistories.jl3Fitting astrophysical star formation histories via CMD modelling.
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ModiaPlot.jl3Convenient line plots of time series data identified by string keys (using GLMakie)
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StochasticBlockModel.jl3A Julia package for Stochastic Block Models
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PolaronMakie.jl3Interactive visualisations for the variational polaron problem with Makie.
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PolaronPathIntegrals.jl3An implementation of Feynman's variational path integral technique, written in Julia, for the determination of phenomenological properties of the electron in electronic materials.
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BackgroundSubtraction.jl3A collection of background subtraction algorithms for spectroscopic data
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Bactos.jl3Agent-based modeling framework for bacterial behavior, based on Agents.jl
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