Simulations of epithelial dynamics in 1D.

This package simplifies evolutionary algorithms for applications in systems biology. It can be used to generate oscillating reaction networks, networks that match input timeseries data, or fit parameters (rateconstants).

Plots.jl recipes for the GeoStats.jl framework

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The Virtual Plant Laboratory

Generalized linear models for cell-cell communication

Reduced Basis Methods for Particle Systems

Methods for the evaluation of maximum entropy distributions

Julia implementation of Path Weight Sampling (PWS) to compute information transmission rates

Gaussian Mixture Model Parameter Estimation

A reverse McCormick operator library

Data structures for graph neural network

Valid Discrete-Time Methods for Relaxing pODEs

Implementation of Guided Proposals (introduced by M Schauer, F van der Meulen, H van Zanten)

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Plotting Radiotherapy Beam-Limiting Devices using Plots.jl

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Package for generating masks and line lists for use in stellar radial velocity measurements

The gap between theory and practice is in practice greater than in theory.

PALEOtoolkit sediment components and standalone examples

Discriminative Circuits from the Juice library

A small package for differentiable discontinuities in Julia.

Read and analyze EPOCH simulation data

Automatically Differentiate the backward Euler method

Aquatic biogeochemistry for PALEO framework

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Plots for ComputerAdaptiveTesting.jl and FittedItemBanks.jl

Julia package dedicated to modeling and solving the change of reference frame problem for self-deforming bodies.

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Hyperelastic Material modelling with support for Automatic Differentiation

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SimSpread is a novel approach for predicting interactions between two distinct set of nodes, query and target nodes, using a similarity measure vector between query nodes as a meta-description in combination with the network-based inference for link prediction.

Julia package for handling image annotation I/O

Compute solar radiation and generate sky domes for VPL

SMLMBoxer.jl is a Julia package that provides a fast and efficient method for detecting particles or blobs in a multidimensional image stack and cutting out sub-regions around local maxima.

Reconstruction of binary arrays using correlation functions and simulated annealing