Dependency Packages
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ProcessBasedModelling.jl0Build equations with informative errors for missing variables by explicitly assigning a process to each variable of the equations
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ProbabilisticParameterEstimators.jl0Parameter estimation under uncertainty.
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BiochemNetABC.jl0A Julia package for simulation, verification and parameter estimation of Biochemical Networks with Approximate Bayesian Computation (ABC) methods.
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PredictMDFull.jl0-
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PredictMDExtra.jl0-
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NaiveDESPOT.jl0Trying something based on DESPOT
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PQBaseCamp.jl0Base data analysis methods for Paliquant
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GenieBuiltLifeProto.jl0-
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SymplecticMapTools.jl0-
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MCParticles.jl0-
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BHAPtfem.jl0BHA analysis using PtFEM (currently used as a limited check on BHAtp's FEM results).
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GenomicOffsets.jl0Genomic offset statistics
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PooksoftOptionsKit.jl0Julia package with methods for computing options pricing, profit and loss
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GittinsIndices.jl0A julia package to compute Gittins Indices for Multi Armed Bandits
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TableOne.jl0Summarize a DataFrame, as might be needed for a manuscript's *Table 1*
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BenchmarkEnvironments.jl0Standard environments for benchmarking the performance of RL algorithms.
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GlobalSearchRegressionGUI.jl0Global Search Regression GUI
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PolyaGammaSamplers.jl0-
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GModelFitViewer.jl0GModelFitViewer - web viewer for the GModelFit produced results
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TaijaBase.jl0Base package that ships symbols and functionality that is relevant to all or multiple packages in the ecosystem
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TaijaData.jl0-
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TaijaParallel.jl0Adds support for parallelization for Taija packages.
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WeightedArrays.jl0Matrices with column weights
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MvNormalCalibration.jl0-
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BEASTDataPrep.jl0Standard data cleaning tools prior to generating BEAST xml file
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TaylorInversion.jl0A Julia package for inverting Taylor series
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MeanFieldGraph.jl0Estimation in a mean field graph
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PlotPlants.jl0Yujie's customized plotting utilities
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TemporalNetworks.jl0-
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TensegrityEquilibria.jl0-
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GreedyAlign.jl0-
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BcdiSimulate.jl0-
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TensorDecompositions.jl0Tensor decomposition algorithms
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BaytesSMC.jl0BaytesSMC.jl is a library to perform SMC proposal steps on `ModelWrapper` structs, see ModelWrappers.jl. Kernels that are defined in BaytesMCMC.jl and BaytesFilters.jl can be used inside this library.
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BaytesPMCMC.jl0A library to perform particle MCMC proposal steps for parameter in a `ModelWrapper` struct, see [ModelWrappers.jl](https://github.com/paschermayr/ModelWrappers.jl).
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GREMLModels.jl0-
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BaytesOptim.jl0Optimization library for Baytes modules
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BaytesMCMC.jl0A library to perform MCMC proposal steps on `ModelWrapper` structs, see ModelWrappers.jl.
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Walker2020Sampling.jl0Sampling from an unnormalized pdf in Julia using Walker's MCMC algorithm
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BaytesFilters.jl0A library to perform particle filtering for one parameter in a `ModelWrapper` struct.
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